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Hello,
thanks for the very interesting tool. I am trying to apply the LIANA Orthology Conversion tutorial to my data but unfortunately after running:
ortholog_resource <- generate_homologs(op_resource = op_resource,
target_organism = 10090) # mouse
I get this error:
[2025-01-29 17:03:11] [SUCCESS] [OmnipathR] NCBI HomoloGene (rescued.omnipathdb.org): downloaded 2 records
Error in UseMethod("filter") :
no applicable method for 'filter' applied to an object of class "list"
I have also tried to reinstall the library as suggested in previous closed issues but still it is not working.
Do you have any suggestions on that?
Best regards,
Vasiliki
The text was updated successfully, but these errors were encountered:
Hello,
thanks for the very interesting tool. I am trying to apply the LIANA Orthology Conversion tutorial to my data but unfortunately after running:
ortholog_resource <- generate_homologs(op_resource = op_resource,
target_organism = 10090) # mouse
I get this error:
[2025-01-29 17:03:11] [SUCCESS] [OmnipathR] NCBI HomoloGene (rescued.omnipathdb.org): downloaded 2 records
Error in UseMethod("filter") :
no applicable method for 'filter' applied to an object of class "list"
I have also tried to reinstall the library as suggested in previous closed issues but still it is not working.
Do you have any suggestions on that?
Best regards,
Vasiliki
The text was updated successfully, but these errors were encountered: