DESCRIPTION

Package: lotR
Type: Package
Title: Latent class analysis with Observed Trees in R (lotR)
Version: 0.8.1.004
Date: 2021-09-29
Authors@R: c(
     person("Zhenke", "Wu", email="zhenkewu@umich.edu",role=c("cre","aut"),
     comment = c(ORCID = "0000-0001-7582-669X"))
     )
Maintainer: Zhenke Wu <zhenkewu@umich.edu>
Description: This package implements fast algorithms to fit latent class models
    for integrating given tree-information that specifies the relatedness among
    the observations. 
Depends:
    R(>= 3.5.0)
Imports:
    matrixStats(>= 0.52.2),
    Rcpp(>= 0.12.15),
    stats(>= 3.4.1),
    graphics(>= 3.4.1),
    grDevices(>= 3.4.1),
    BayesLCA(>= 1.9),
    ggtree(>= 2.0.1),
    igraph(>= 1.2.5),
    foreach (>= 1.5.0),
    ggplot2 (>= 3.2.1),
    R.utils (>= 2.9.2),
    Matrix (>= 1.2-17),
    RColorBrewer(>= 1.1-2),
    MASS(>= 7.3),
    ape(>= 5.4-1),
    reshape2(>= 1.4.4)
Suggests:
    knitr,
    testthat,
    bibtex,
    rmarkdown,
    ars(>= 0.5),
    RcppArmadillo(>= 0.8.300.1.0)
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
VignetteBuilder: knitr
Remotes: cran/knitcitations
RoxygenNote: 7.1.1
URL: https://github.com/zhenkewu/lotR
BugReports: https://github.com/zhenkewu/lotR/issues
LinkingTo: Rcpp, RcppArmadillo
Roxygen: list(markdown = TRUE)