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An application to quantify chick vascular structures based on microscopy images

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TimPaquaij/Chick-Vascular-Quantification-App

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Chick Vascular Quantification App

This app quantifies chick vascular structures within microscopy images using a computer vision and deep learning approach. The application is based on tkinter UI and utilises Keras/Tensorflow for the nerual network architecture. Furthemore the ability to connect a microscopy camera has been added to quantify the chick vascular structure real-time.

An overview of the workflow is given by the figure underneath:

Run the app

python main.py

Results

This app can be used to generate the following results based on microscopy images of atleast 256 pixels.

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An application to quantify chick vascular structures based on microscopy images

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