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Release minimap2-2.29 (r1283) CI #251: Commit 1fd85be pushed by lh3
April 18, 2025 17:42 1m 20s master
master
April 18, 2025 17:42 1m 20s
r1281: with --write-junc, ignore aln with low mapQ CI #250: Commit b58b974 pushed by lh3
April 18, 2025 01:47 1m 7s master
master
April 18, 2025 01:47 1m 7s
r1280: heuristic to avoid aligning full introns CI #249: Commit df9e650 pushed by lh3
April 17, 2025 03:39 1m 4s master
master
April 17, 2025 03:39 1m 4s
r1278: reduced --min-dp-len to 20 for splice:sr CI #248: Commit 7a540c3 pushed by lh3
April 17, 2025 01:56 1m 4s master
master
April 17, 2025 01:56 1m 4s
r1277: don't apply rescored filtering with -P CI #246: Commit c19e3cc pushed by lh3
April 15, 2025 02:31 1m 22s master
master
April 15, 2025 02:31 1m 22s
r1276: skip unnecessary reverse spliced alignment CI #245: Commit 94d171b pushed by lh3
April 14, 2025 18:58 1m 4s master
master
April 14, 2025 18:58 1m 4s
documented 2-pass in README CI #244: Commit ff312a2 pushed by lh3
April 13, 2025 21:14 1m 9s master
master
April 13, 2025 21:14 1m 9s
r1275: renamed --jump-pass1 to --pass1 CI #243: Commit 01ccedd pushed by lh3
April 13, 2025 21:08 1m 5s master
master
April 13, 2025 21:08 1m 5s
r1274: a little better pass-1 CI #242: Commit 819b3bf pushed by lh3
April 13, 2025 17:56 1m 5s master
master
April 13, 2025 17:56 1m 5s
r1273: reading pass1 junctions works CI #241: Commit e881104 pushed by lh3
April 13, 2025 04:47 1m 3s master
master
April 13, 2025 04:47 1m 3s
r1272: support pass-1 junction processing CI #240: Commit fb81e15 pushed by lh3
April 13, 2025 03:15 1m 5s master
master
April 13, 2025 03:15 1m 5s
r1270: fixed ts tag for PE reads CI #239: Commit a832a42 pushed by lh3
April 11, 2025 05:08 1m 3s master
master
April 11, 2025 05:08 1m 3s
r1269: added --write-junc CI #238: Commit a5411fc pushed by lh3
April 11, 2025 05:01 2m 18s master
master
April 11, 2025 05:01 2m 18s
r1268: avoid extra small introns CI #237: Commit bd03d97 pushed by lh3
April 8, 2025 03:33 1m 20s master
master
April 8, 2025 03:33 1m 20s
r1267: penalize introns without signals CI #236: Commit 9c3c4b1 pushed by lh3
April 7, 2025 13:51 1m 7s master
master
April 7, 2025 13:51 1m 7s
r1266: fine tune mapq for short RNA-seq reads CI #235: Commit 3542a3d pushed by lh3
April 7, 2025 04:57 1m 1s master
master
April 7, 2025 04:57 1m 1s
r1265: prefer spliced alignment CI #234: Commit 75619c7 pushed by lh3
April 7, 2025 04:31 1m 2s master
master
April 7, 2025 04:31 1m 2s
r1264: added --jump-min-match, default to 3 CI #233: Commit fbb9c0f pushed by lh3
April 7, 2025 03:19 1m 11s master
master
April 7, 2025 03:19 1m 11s
r1263: ~5-10% performance improvement CI #232: Commit af09464 pushed by lh3
April 7, 2025 00:50 1m 7s master
master
April 7, 2025 00:50 1m 7s
fixed minor grammar issues CI #231: Commit d43f356 pushed by lh3
April 6, 2025 22:35 1m 10s master
master
April 6, 2025 22:35 1m 10s
r1261: code clean up; renamed --jump-bed to -j CI #230: Commit 38acd66 pushed by lh3
April 6, 2025 22:33 1m 5s master
master
April 6, 2025 22:33 1m 5s
r1259: --jump-bed now functional CI #229: Commit 54a4718 pushed by lh3
April 6, 2025 21:13 1m 10s master
master
April 6, 2025 21:13 1m 10s
caution that the splice:sr is experimental CI #228: Commit dd90d9d pushed by lh3
April 4, 2025 20:35 1m 4s master
master
April 4, 2025 20:35 1m 4s
r1249: remove redundant junctions in --junc-bed CI #227: Commit cbe8d61 pushed by lh3
April 4, 2025 00:43 1m 3s master
master
April 4, 2025 00:43 1m 3s
r1248: support --end-bonus in splice mode CI #226: Commit 9d06cef pushed by lh3
April 3, 2025 16:19 1m 11s master
master
April 3, 2025 16:19 1m 11s