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Meiler Lab

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  1. HyperMPNN HyperMPNN Public

    HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles

    Jupyter Notebook 53 9

  2. MolKGNN MolKGNN Public

    Forked from LanceKnight/MolKGNN

    MolKGNN is a deep learning model for predicting biological activity or molecular properties. It features in 1. SE(3)-invariance 2. conformation-invariance 3. interpretability. MolKGNN uses a novel …

    Python 19 3

  3. AF2_GPCR_Kinase AF2_GPCR_Kinase Public

    Forked from delalamo/af2_conformations

    A series of scripts that facilitate the prediction of user-defined protein structural properties using AlphaFold2

    Python 11 2

  4. probabilities_design probabilities_design Public

    Jupyter Notebook 10 1

  5. PLM_restraint PLM_restraint Public

    Shell 9

  6. PTMPrediction PTMPrediction Public

    Supporting information for predicting and engineering post-translational modifcations using Rosetta

    PureBasic 7 1

Repositories

Showing 10 of 18 repositories
  • vustruct Public

    VUStruct analyses sets of Variants of Unknown Significance (VUSs) by contextualizing them in 3D protein structural space.

    meilerlab/vustruct’s past year of commit activity
    Python 0 MIT 0 49 0 Updated Mar 13, 2025
  • HyperMPNN Public

    HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles

    meilerlab/HyperMPNN’s past year of commit activity
    Jupyter Notebook 53 MIT 9 1 0 Updated Feb 19, 2025
  • KCNQ1-PyTorch Public

    Implementation of the KCNQ1 project in PyTorch

    meilerlab/KCNQ1-PyTorch’s past year of commit activity
    Python 0 0 0 2 Updated Nov 20, 2024
  • probabilities_design Public
    meilerlab/probabilities_design’s past year of commit activity
    Jupyter Notebook 10 1 1 0 Updated Oct 24, 2024
  • gnn-descriptor Public Forked from LanceKnight/gnn-descriptor
    meilerlab/gnn-descriptor’s past year of commit activity
    Python 1 1 0 0 Updated Jul 11, 2024
  • ML_PLS_MHC_peptide_binding_pred Public Forked from sjiang29/ML_PLS_MHC_peptide_binding_pred

    A machine learning application using PLS to predict binding affinity between MHC(A0201) and peptide containing NCAAs

    meilerlab/ML_PLS_MHC_peptide_binding_pred’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Jul 8, 2024
  • PTMPrediction Public

    Supporting information for predicting and engineering post-translational modifcations using Rosetta

    meilerlab/PTMPrediction’s past year of commit activity
    PureBasic 7 MIT 1 0 0 Updated Feb 13, 2024
  • PLM_restraint Public
    meilerlab/PLM_restraint’s past year of commit activity
    Shell 9 0 0 0 Updated Nov 7, 2023
  • AF2_GPCR_Kinase Public Forked from delalamo/af2_conformations

    A series of scripts that facilitate the prediction of user-defined protein structural properties using AlphaFold2

    meilerlab/AF2_GPCR_Kinase’s past year of commit activity
    Python 11 MIT 25 1 0 Updated Aug 28, 2023
  • discovery-self-peptides-hypertension Public Forked from nbloodworth/discovery-self-peptides-hypertension

    Official repository containing code, protocol capture, and files used to generate data for the manuscipt entitled "Discovery of post-translationally modified self-peptides that promote hypertension"

    meilerlab/discovery-self-peptides-hypertension’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Jul 20, 2023
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