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@jump-cellpainting JUMP-Cell Painting Consortium

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    15 repositories

    • 2024_Chandrasekaran_Morphmap

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •3•1•0•0•Updated Mar 5, 2025Mar 5, 2025

    • datasets

      Public
      Images and other data from the JUMP Cell Painting Consortium
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •18•167•38•2•Updated Feb 16, 2025Feb 16, 2025

    • 2024_Chandrasekaran_NatureMethods

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •11•60•4•0•Updated Feb 14, 2025Feb 14, 2025

    • 2024_Chandrasekaran_Production

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•2•0•Updated Jan 4, 2025Jan 4, 2025

    • JUMP-MOA

      Public
      A list of compounds with diverse MOAs that fit on a single 384-well plate, with 4 replicates per compound
      MIT License
      •3•6•0•0•Updated Jan 3, 2025Jan 3, 2025

    • JUMP-Target

      Public
      Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays
      MIT License
      •5•21•1•0•Updated Jan 3, 2025Jan 3, 2025

    • pilot-cpjump1-data

      Public archive
      [OUTDATED] JUMP-CP CPJUMP1 data
      HTML
      •
      MIT License
      •0•1•0•0•Updated Nov 14, 2024Nov 14, 2024

    • cpg0016-jump-orf-data

      Public
      Data repository for cpg0016-jump[orf]
      BSD 3-Clause "New" or "Revised" License
      •1•1•0•2•Updated Oct 21, 2024Oct 21, 2024

    • compound-annotator

      Public archive
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •4•1•4•0•Updated Oct 20, 2024Oct 20, 2024

    • embedder

      Public
      Computing per-cell embeddings for all cpg0016-jump
      Python
      •
      Apache License 2.0
      •1•2•2•0•Updated May 31, 2024May 31, 2024

    • jump-scope-analysis

      Public
      Jupyter Notebook
      •0•0•3•0•Updated Jun 14, 2023Jun 14, 2023

    • profiling-recipe

      Public
      Image-based Profiling Recipe
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •28•5•0•0•Updated Dec 12, 2022Dec 12, 2022

    • pilot-data-public

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Oct 30, 2022Oct 30, 2022

    • jump-scope

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Sep 18, 2022Sep 18, 2022

    • pilot-cpjump1-fov-data

      Public
      CPJUMP1 FOV data
      resultspublicbydefault
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•1•0•Updated Jul 23, 2021Jul 23, 2021