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Issues list

subprocess.CalledProcessError using colabfold to search complex fasta
#702 opened Apr 11, 2025 by mzc2113391
BioEmu run error
#701 opened Apr 8, 2025 by CSB-KaracaLab
2
Error with RosettaFold2 Setup
#700 opened Apr 3, 2025 by Triruben
colabfold_search: error: unrecognized arguments: --gpu 1
#699 opened Mar 28, 2025 by wh277
mmCIF file missing required field _entity_poly_seq.mon_id
#698 opened Mar 27, 2025 by thall-bsc
Installation with singularity
#696 opened Mar 25, 2025 by imu93
localcolabfold raise error "malloc(): invalid size (unsorted)" during expandaln
#691 opened Mar 9, 2025 by yanj14jy15
7
Potential optimization
#690 opened Mar 6, 2025 by yanj14jy15
Expected performance for GPU e2e, seems slow
#689 opened Mar 3, 2025 by agenore
how to parallelize tsv2exprofiledb?
#686 opened Feb 21, 2025 by saro2-a
In colabfold_search GPU mmseqs not compatible with --use-templates 1
#685 opened Feb 20, 2025 by seanrjohnson
1
prediction error using alphafold multimer
#684 opened Feb 18, 2025 by sjnoh8
Issue with ColabFold_search (GPU version): MSA Order and Database Differences
#683 opened Feb 13, 2025 by real-junjiezhang
Issue with mmseqs expandaln in MMseqs2 (CPU version) for Large MSA Generation
#682 opened Feb 9, 2025 by real-junjiezhang
3
Spire DB Download?
#681 opened Feb 6, 2025 by brianloyal
2
Data Security of MSA server
#679 opened Jan 27, 2025 by anishazaveri
Error: Input uniref30_2302 does not exist
#678 opened Jan 24, 2025 by ASIWU
Discrepancies in Template Search Between Server and Local With Same Input MSA
#676 opened Jan 15, 2025 by galmzip
Encountering Rate Limit Despite MSA Server Not Being Used
#675 opened Jan 13, 2025 by drb450
1
Latest GPU-supported search.py fails at expandaln
#674 opened Jan 8, 2025 by sami-chaaban
4
Plans to release tag/release for mmseqs-gpu compatibility?
#673 opened Jan 6, 2025 by alextruong
Boltz only runs test 5c831
#669 opened Dec 13, 2024 by jenchem-ot
During run Prediction
#667 opened Dec 2, 2024 by cjwilli98
3
Local MSA results different from MSA server
#665 opened Nov 25, 2024 by sangyeon-hits
7
Logic error in error handling for MMSeqs2 server connection
#663 opened Nov 18, 2024 by tristanic
1
ProTip! Updated in the last three days: updated:>2025-04-13.