🧬 gget enables efficient querying of genomic reference databases

Access to Biological Web Services from Python.

Bio4j abstract model and general entry point to the project

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities

Protein Alignment and Detection Interface

3D hotspot mutation proximity analysis tool

Comprehensive Python client for the Uniprot REST API

Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicates(Optional, maybe lost some conformation changed structures) and save as "UniprotID-PDBID-ModelID-ChainID.pdb/cif".

Feature Annotation Location Description Ontology

Efficient querying of biological databases

MOLeculAR structure annoTator

ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.

UniProt Id Mapping through API

PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.

Go REST API to replace Genbank, Uniprot, Rhea, and CHEMBL

A Ruby on Rails application for proteomics data analysis

rbioapi: User-Friendly R Interface to Biologic Web Services' API

Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.

naive index and query scripts for free reference bioinformatics datasets

A Python script to map PDB ID + chain ID to UniProt ID.